Publications
Information about journal articles, updated at 17-12-2023, from platform CIÊNCIAVITAE.
"Pathways of drinking water microbiota in a gut-breast cancer axis"
Ana Branco Maranha Tiago 301C-9125-034E; Alarico, Susana; Nunes-Costa, Daniela; Melo-Marques I; Pedro Castanheira; Olga Caramelo; Empadinhas, Nuno, Frontiers in Cellular and Infection Microbiology . 2024. submitted Frontiers in Cellular and Infection Microbiology
Sustainable starch-based edible films with agrifood residues as potential carriers for the probiotic Lactobacillus rhamnosus
Coimbra, Patrícia; Alarico, Susana; Empadinhas, Nuno; Braga, Mara E.M.; Gaspar, Marisa C., Innovative Food Science & Emerging Technologies. 88. 2023. http://dx.doi.org/10.1016/j.ifset.2023.103452 . 10.1016/j.ifset.2023.103452 . accepted Innovative Food Science & Emerging Technologies
Effect of ScCO2 on the decontamination of PECs-based cryogels: A comparison with H2O steam and H2O2 nebulization methods
Cristiana S.A. Bento; Henrique Carrelo; Susana Alarico; Nuno Empadinhas; Hermínio C. de Sousa; Maria Teresa Cidade; Mara E.M. Braga, International Journal of Pharmaceutics. 2023. https://doi.org/10.1016/j.ijpharm.2023.123451 . 10.1016/j.ijpharm.2023.123451 . International Journal of Pharmaceutics
A review on urinary tract infections diagnostic methods: Laboratory-based and point-of-care approaches
Santos, Marta; Mariz, Marcos; Tiago, Igor; Martins, Jimmy; Alarico, Susana; Ferreira, Paula, Journal of Pharmaceutical and Biomedical Analysis. 219. 2022. http://dx.doi.org/10.1016/j.jpba.2022.114889 . 10.1016/j.jpba.2022.114889 . Journal of Pharmaceutical and Biomedical Analysis
Sequential scCO2 drying and sterilisation of alginate-gelatine aerogels for biomedical applications
Bento, Cristiana S.A.; Alarico, Susana; Empadinhas, Nuno; de Sousa, Hermínio C.; Braga, Mara E.M., The Journal of Supercritical Fluids. 184. 2022. http://dx.doi.org/10.1016/j.supflu.2022.105570 . 10.1016/j.supflu.2022.105570 . The Journal of Supercritical Fluids
Footprints of a microbial toxin from the gut microbiome to mesencephalic mitochondria
Esteves, A Raquel; Munoz-Pinto, Mário F; Nunes-Costa, Daniela; Candeias, Emanuel; Silva, Diana F; Magalhães, João D; Pereira-Santos, A Raquel; et al, Gut. gutjnl - 2021. 2021. http://dx.doi.org/10.1136/gutjnl-2021-326023 . 10.1136/gutjnl-2021-326023 . Gut
Improved diabetic wound healing by bovine lactoferricin is associated with relevant changes in the skin immune response and microbiota
MV Mouritzen; Petkovic, Marija; K Qvist; SS Poulsen; Alarico, Susana; Leal, EC; LT Dalgaard; et al, Molecular Therapy - Methods & Clinical Development . 726 - 739. 20. 2021. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7940703/ . published Molecular Therapy - Methods & Clinical Development
A genuine mycobacterial thermophile: Mycobacterium hassiacum growth, survival and GpgS stability at near-pasteurization temperatures
Alarico, Susana; Daniela Nunes-Costa; Alexandra Silva; Mafalda Costa; Sandra Macedo-Ribeiro; Nuno Empadinhas, Microbiology. 474 - 483. 166. 2020. https://doi.org/10.1099/mic.0.000898 . 10.1099/mic.0.000898 . published Microbiology
Studies of antimicrobial resistance in rare mycobacteria from a nosocomial environment
Pereira, S.G.; Alarico, S.; Tiago, I.; Reis, D.; Nunes-Costa, D.; Cardoso, O.; Maranha, A.; Empadinhas, N., BMC Microbiology. 1. 19. 2019. http://www.scopus.com/inward/record.url?eid=2-s2.0-85063152478&partnerID=MN8TOARS . 10.1186/s12866-019-1428-4 . published BMC Microbiology
The structural characterization of a glucosylglycerate hydrolase provides insights into the molecular mechanism of mycobacterial recovery from nitrogen starvation
Tatiana Barros Cereija; Susana Alarico; Eva C. Lourenço; José António Manso; M. Rita Ventura; Nuno Empadinhas; Sandra Macedo-Ribeiro; Pedro José Barbosa Pereira, IUCrJ. 572 - 585. 4. 6. 2019. https://doi.org/10.1107/S2052252519005372 . 10.1107/S2052252519005372 . published IUCrJ
High-quality draft genome sequences of rare nontuberculous mycobacteria isolated from surfaces of a hospital
Tiago, I.; Alarico, S.; Maranha, A.; Coelho, C.; Pereira, S.G.; Empadinhas, N., Microbiology Resource Announcements. 21. 8. 2019. http://www.scopus.com/inward/record.url?eid=2-s2.0-85067244749&partnerID=MN8TOARS . 10.1128/MRA.00496-19 . published Microbiology Resource Announcements
Hand hygiene management among nurses: collective health challenges
Graveto, J.M.; Santos, C.; Costa, P.S.; Fernandes, E.; Alarico, S.; Osório, N.; Albano, H.; Oliveira, V., Revista brasileira de enfermagem. 562 - 567. 71. 2018. http://www.scopus.com/inward/record.url?eid=2-s2.0-85054031940&partnerID=MN8TOARS . 10.1590/0034-7167-2017-0538 . published Revista brasileira de enfermagem
Production, crystallization and structure determination of a mycobacterial glucosylglycerate hydrolase
Cereija, T.B.; Alarico, S.; Empadinhas, N.; Pereira, P.J.B., Acta Crystallographica Section:F Structural Biology Communications. 536 - 540. 9. 73. 2017. http://www.scopus.com/inward/record.url?eid=2-s2.0-85028856991&partnerID=MN8TOARS . 10.1107/S2053230X17012419 . published Acta Crystallographica Section:F Structural Biology Communications
Hospital microbial surface colonization revealed during monitoring of Klebsiella spp., Pseudomonas aeruginosa, and non-tuberculous mycobacteria
Geadas Farias, P.; Gama, F.; Reis, D.; Alarico, S.; Empadinhas, N.; Martins, J.C.; de Almeida, A.F.; Morais, P.V., Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology. 1 - 14. 2017. http://www.scopus.com/inward/record.url?eid=2-s2.0-85015912782&partnerID=MN8TOARS . 10.1007/s10482-017-0857-z . published Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology
Glucosylglycerate metabolism, bioversatility and mycobacterial survival
Nunes-Costa, D.; Maranha, A.; Costa, M.; Alarico, S.; Empadinhas, N., Glycobiology. 213 - 227. 3. 27. 2017. http://www.scopus.com/inward/record.url?eid=2-s2.0-85015842532&partnerID=MN8TOARS . 10.1093/glycob/cww132 . Glycobiology
The looming tide of nontuberculous mycobacterial infections in Portugal and Brazil
Nunes-Costa, D.; Alarico, S.; Dalcolmo, M.P.; Correia-Neves, M.; Empadinhas, N., Tuberculosis. 107 - 119. 96. 2016. http://www.scopus.com/inward/record.url?eid=2-s2.0-84954422186&partnerID=MN8TOARS . 10.1016/j.tube.2015.09.006 . published Tuberculosis
Mycobacterium hassiacum recovers from nitrogen starvation with up-regulation of a novel glucosylglycerate hydrolase and depletion of the accumulated glucosylglycerate
Alarico, S.; Costa, M.; Sousa, M.S.; Maranha, A.; Lourenço, E.C.; Faria, T.Q.; Ventura, M.R.; Empadinhas, N., Scientific Reports. 4. 2014. http://www.scopus.com/inward/record.url?eid=2-s2.0-84925854243&partnerID=MN8TOARS . 10.1038/srep06766 . published Scientific Reports
The molecular biology of mycobacterial trehalose in the quest for advanced tuberculosis therapies
Nobre, A.; Alarico, S.; Maranha, A.; Mendes, V.; Empadinhas, N., Microbiology (United Kingdom). 1547 - 1570. PART 8. 160. 2014. http://www.scopus.com/inward/record.url?eid=2-s2.0-84905216311&partnerID=MN8TOARS . 10.1099/mic.0.075895-0 . published Microbiology (United Kingdom)
A new bacterial hydrolase specific for the compatible solutes a-d-mannopyranosyl-(1¿2)-d-glycerate and a-d-glucopyranosyl-(1¿2)-d-glycerate
Alarico, S.; Empadinhas, N.; da Costa, M.S., Enzyme and Microbial Technology. 77 - 83. 2. 52. 2013. http://www.scopus.com/inward/record.url?eid=2-s2.0-84871684186&partnerID=MN8TOARS . 10.1016/j.enzmictec.2012.10.008 . published Enzyme and Microbial Technology
Genome sequence of Mycobacterium hassiacum DSM 44199, a rare source of heat-stable mycobacterial proteins
Tiago, I.; Maranha, A.; Mendes, V.; Alarico, S.; Moynihan, P.J.; Clarke, A.J.; Macedo-Ribeiro, S.; Pereira, P.J.B.; Empadinhas, N., Journal of Bacteriology. 7010 - 7011. 24. 194. 2012. http://www.scopus.com/inward/record.url?eid=2-s2.0-84870688429&partnerID=MN8TOARS . 10.1128/JB.01880-12 . published Journal of Bacteriology
Biosynthesis of mycobacterial methylglucose lipopolysaccharides
Mendes, V.; Maranha, A.; Alarico, S.; Empadinhas, N., Natural Product Reports. 834 - 844. 8. 29. 2012. http://www.scopus.com/inward/record.url?eid=2-s2.0-84863933998&partnerID=MN8TOARS . 10.1039/c2np20014g . published Natural Product Reports
Mycobacterium tuberculosis Rv2419c, the missing glucosyl-3-phosphoglycerate phosphatase for the second step in methylglucose lipopolysaccharide biosynthesis
Mendes, V.; Maranha, A.; Alarico, S.; Da Costa, M.S.; Empadinhas, N., Scientific Reports. 1. 2011. http://www.scopus.com/inward/record.url?eid=2-s2.0-84859749065&partnerID=MN8TOARS . 10.1038/srep00177 . published Scientific Reports
A unique combination of genetic systems for the synthesis of trehalose in Rubrobacter xylanophilus: Properties of a rare actinobacterial TreT
Nobre, A.; Alarico, S.; Fernandes, C.; Empadinhas, N.; Da Costa, M.S., Journal of Bacteriology. 7939 - 7946. 24. 190. 2008. http://www.scopus.com/inward/record.url?eid=2-s2.0-57349146679&partnerID=MN8TOARS . 10.1128/JB.01055-08 . published Journal of Bacteriology
Molecular and physiological role of the trehalose-hydrolyzing a-glucosidase from Thermus thermophilus HB27
Alarico, S.; Da Costa, M.S.; Empadinhas, N., Journal of Bacteriology. 2298 - 2305. 7. 190. 2008. http://www.scopus.com/inward/record.url?eid=2-s2.0-41549086172&partnerID=MN8TOARS . 10.1128/JB.01794-07 . published Journal of Bacteriology
Mannosylglycerate is essential for osmotic adjustment in Thermus thermophilus strains HB27 and RQ-1
Alarico, S.; Empadinhas, N.; Mingote, A.; Simões, C.; Santos, M.S.; Da Costa, M.S., Extremophiles. 833 - 840. 6. 11. 2007. http://www.scopus.com/inward/record.url?eid=2-s2.0-35748948644&partnerID=MN8TOARS . 10.1007/s00792-007-0106-x . published Extremophiles
Trehalose biosynthesis in Thermus thermophilus RQ-1: Biochemical properties of the trehalose-6-phosphate synthase and trehalose-6-phosphate phosphatase
Silva, Z.; Alarico, S.; Da Costa, M.S., Extremophiles. 29 - 36. 1. 9. 2005. http://www.scopus.com/inward/record.url?eid=2-s2.0-14644419634&partnerID=MN8TOARS . 10.1007/s00792-004-0421-4 . published Extremophiles
Distribution of genes for synthesis of trehalose and mannosylglycerate in Thermus spp. and direct correlation of these genes with halotolerance
Alarico, S.; Empadinhas, N.; Simões, C.; Silva, Z.; Henne, A.; Mingote, A.; Santos, H.; Da Costa, M.S., Applied and Environmental Microbiology. 2460 - 2466. 5. 71. 2005. http://www.scopus.com/inward/record.url?eid=2-s2.0-18444382346&partnerID=MN8TOARS . 10.1128/AEM.71.5.2460-2466.2005 . published Applied and Environmental Microbiology
Osmotic adaptation of Thermus thermophilus RQ-1: Lesson from a mutant deficient in synthesis of trehalose
Silva, Z.; Alarico, S.; Nobre, A.; Horlacher, R.; Marugg, J.; Boos, W.; Mingote, A.I.; Da Costa, M.S., Journal of Bacteriology. 5943 - 5952. 20. 185. 2003. http://www.scopus.com/inward/record.url?eid=2-s2.0-0141960378&partnerID=MN8TOARS . 10.1128/JB.185.20.5943-5952.2003 . published Journal of Bacteriology
Rubritepida flocculans gen. nov., sp. nov., a new slightly thermophilic member of the a-1 subclass of the Proteobacteria
Alarico, S.; Rainey, F.A.; Empadinhas, N.; Schumann, P.; Nobre, M.F.; Da Costa, M.S., Systematic and Applied Microbiology. 198 - 206. 2. 25. 2002. http://www.scopus.com/inward/record.url?eid=2-s2.0-0036671222&partnerID=MN8TOARS . published Systematic and Applied Microbiology
5 29 out of 29 Publications
All projects
Information of exclusive responsibility of the researcher 17-12-2023 , from platform CIÊNCIAVITAE.
2023/05 -
TimeUp - Technology for Infection Monitoring and Evidence of UroPathogens - Call INNOV ID, 3.ªEd, Portugal Ventures
Call INNOV-ID 3.ª Ed
Principal investigator
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Portugal Ventures - Sociedade de Capital de Risco
2023 -
Obesidade e saúde oral: criação e validação de um modelo preditivo de cárie dentária
12/2023
Researcher
Universidade de Coimbra Faculdade de Medicina
2023 -
GAinPD: Validation of bacterial-derived anti-inflammatory mediators in gut-first PD
CP code: SC01
Researcher
Universidade de Coimbra Centro de Inovação em Biomedicina e Biotecnologia
Funders: Cure Parkinson's UK
2023 -
AMRFight - Exploring bacterial interactions to find novel molecules to combat the antimicrobial resistance catastrophe
2022.06809.PTDC
Researcher
Universidade de Coimbra Centro de Inovação em Biomedicina e Biotecnologia
Funders: Fundação para a Ciência e a Tecnologia
2022 -
NTMENACE - Mycobacteria from drinking water: beyond the lung disease epidemic
PTDC/BIA-MIC/0122/2021
Researcher
Universidade de Coimbra Centro de Inovação em Biomedicina e Biotecnologia
Funders: Fundação para a Ciência e a Tecnologia
2021/07 - 2022/09
Sustainable and dual function polymeric edible films: a probiotic and antioxidant delivery food packaging system
https://www.uc.pt/iii/filmes-comestiveis-polimericos-sustentaveis/
Researcher
Universidade de Coimbra Centro de Investigação em Engenharia dos Processos Químicos e dos Produtos da Floresta
Funders: Universidade de Coimbra; Santander Universities
2021 - 2024
STOPD - The Gut-Immune-Brain Axis in Parkinson disease
PTDC/MED-NEU/3644/2020 (248.992 ¿)
Researcher
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia
2021/01/01 - 2025/12/31
Center for Innovative Biomedicine and Biotechnology - Associate Laboratory
LA/P/0058/2020
Researcher
Universidade de Coimbra
Funders: Fundação para a Ciência e a Tecnologia
2019/01/01 - 2019/12/31
CNC. IBILI
UID/NEU/04539/2019
Researcher
Universidade de Coimbra Centro de Neurociências e Biologia Celular; Universidade de Coimbra; Universidade de Coimbra Instituto de Ciências Nucleares Aplicadas à Saúde; Universidade de Coimbra Instituto de Investigação Clínica e Biomédica de Coimbra
Funders: Fundação para a Ciência e a Tecnologia
2019 - 2021
TimeUp - Technology for Infection Monitoring and Evidence of UroPathogens - EIT Health Innostars headstart Funding Programme Award
CI19-0100
Researcher
Funders: EIT Health
2019 - 2021
TimeUp - Technology for Infection Monitoring and Evidence of UroPathogens - Caixa Impulse 2019
CI19-0100
Researcher
Universidade de Coimbra
Funders: Obra Social La Caixa
2019 - 2022
Project Health in Knowledge - A Saúde no Saber
45-2019/478
Researcher
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Ciência Viva
2019/01/01 - 2022
STERILAEROGEL - Green method to prepare sterilized biopolymer-based aerogels
POCI-01-0145-FEDER-032625
Researcher
Universidade de Coimbra Departamento de Engenharia Quimica
Funders: Fundação para a Ciência e a Tecnologia
2018 - 2019
PROTOTRANSFER - Projeto INESPO III
2014-2020 POCTEP
Principal investigator
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: University of Coimbra, FEDER, 2014-2020 POCTEP
2018 - 2019
PROTOTRANSFER - Projeto INESPO III
2014-2020 POCTEP
Funders: University of Coimbra, FEDER, 2014-2020 POCTEP
2017 - 2019
Microcare - Microbiome of diabetic ulcers: early diagnosis, prognosis and therapy
FIS-FIS-2015-01_DIA_20150630-144
Researcher
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundo para a Investigação em Saúde, INFARMED
2015 - 2018
Defining the missing links in mycobacterial methylglucose lipopolysaccharide biosynthesis
SFRH/BPD/108299/2015
Post-doc Fellow
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia
2014 - 2015
Produção e comercialização global de compostos microbianos essenciais para investigação
INOV.C - Mais Centro / CCDRC
Researcher
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Comissão de Coordenação e Desenvolvimento Regional do Centro
2013/07 - 2015/06
Biosynthesis of rare methylmannose polysaccharides in nontuberculous mycobacteria
128742
Researcher
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia, I.P.
2013/07 - 2015/06
Ambiguity and virulence in a human pathogen
125271
Researcher
Instituto de Biologia Molecular e Celular - IBMC, Instituto para a Investigação e Inovação em Saúde - i3S
Funders: Fundação para a Ciência e a Tecnologia, I.P.
2013/05 - 2015/04
Bioprospecting metagenome from Porcellio dilatatus (Crustacea,Isopoda) guts for plant biomass hydrolytic enzymes
130318
Researcher
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia, I.P.
2012 - 2013
Unravelling the early steps in the biosynthesis of the mycobacterial MGLP
Ref 120123
Researcher
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Mizutani Foundation for Glycoscience
2012 - 2015
The early steps in methylglucose lipopolysaccharide biosynthesis in mycobacteria
SFRH/BPD/43321/2008
Post-doc Fellow
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia
2011/04 - 2013/09
The enigmatic mycobacterial maltokinase
Provided by PTCRIS: 112459
Researcher
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia, I.P.
2011/01 - 2014/06
Pathway for the synthesis of the mycobacterial MGLP. Biochemical and structural characterization of the key enzymes
Provided by PTCRIS: 110523
Researcher
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia, I.P.
2011/01/01 - 2012/12/31
Strategic Project - LA 1 - 2011-2012
PEst-C/SAU/LA0001/2011
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia
2009 - 2012
DECIPHERING THE REGULATORY MECHANISMS CONTROLLING COMPATIBLE SOLUTES BIOSYNTHESIS IN THERMUS THERMOPHILUS OSMO- AND THERMOADAPTATION
info:eu-repo/grantAgreement/FCT/SFRH/SFRH2%FBPD2%F433212%F2008/PT
Post-doc Fellow
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia
2008 - 2010
Cloning, expression and regulation of genes for the synthesis of compatible solutes in Thermus thermophilus
Acção Nº E-9/08
Researcher
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Conselho de Reitores das Universidades Portuguesas, Portugal
2005/01 - 2008/04
Nature´s shields to environmental stress. Biosynthesis of compatible solutes in extremely radiation-resistant Rubrobacter spp.
Provided by PTCRIS: 56511
Other
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia, I.P.
2004 - 2006
“Hotsolutes - New applications of compatible solutes from hyperthermophiles”
CRAFT, COOP-CT-2003-508644
Other
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: European Commission Sixth Framework Programme
2004 - 2008
PhD Thesis: Relevance of mannosylglycerate and trehalose accumulation in the osmoadaptation of Thermus thermophilus
SFRH/BD/14140/2003
PhD Student Fellow
Universidade de Coimbra Centro de Neurociências e Biologia Celular
2002 - 2003
EXTREMELY GAMMA RADIATION-RESISTANT BACTERIA: TAXONOMY, DIVERSITY AND PHYSIOLOGY
POCTI/BSE/35029/99
Research Technician Fellow
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia
2002 - 2005
“Hypersolutes - Exploiting new solutes from hyperthermophiles for the preservation of biomaterials: cell factories for production of hypersolutes”
QLK3-CT-2000-00640
Other
Funders: European Commission Sixth Framework Programme
2001 - 2002
Exploração de solutos de organismos hipertermofílicos com vista à sua utilização como estabilizantes de enzimas
PRAXIS/P/BIO/12 082/1998
Research Technician Fellow
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia
2001 - 2002
Exploração de solutos de organismos hipertermofílicos com vista à sua utilização como estabilizantes de enzimas
PRAXIS/P/BIO/12 082/1998
Research Technician Fellow
Universidade de Coimbra Centro de Neurociências e Biologia Celular
Funders: Fundação para a Ciência e a Tecnologia
5 35 out of 35 projects
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